Database of fluorescent protein sequences

A paper recently came out on a web server for predicting the oligomeric state of fluorescent proteins [1]. It’s only about 80% accurate, which isn’t so nice, but they have a github page with sequences for hundreds of fluorescent proteins in a csv file. Tracking down all these sequences can be tedious, so this is a nice resource.

References

  1. S. Simeon, W. Shoombuatong, N. Anuwongcharoen, L. Preeyanon, V. Prachayasittikul, J.E.S. Wikberg, and C. Nantasenamat, "osFP: a web server for predicting the oligomeric states of fluorescent proteins", Journal of Cheminformatics, vol. 8, 2016. http://dx.doi.org/10.1186/s13321-016-0185-8